Seq Comparison


ICE Cluster Computing FAQs | Print |
The U of A UITS (formerly CCIT) group maintains High Performance Computing systems for use in research applications. A shared memory supercomputer (marin) and a Linux cluster (ICE) are available for running jobs requiring a large amount of memory, parallel processing, and certain visualization and scientific applications.  ICE (Integrated Computing Environment) is a large cluster of Silicon Graphics Altix machines (8 cpus per node); for more details see: http://www.sgi.com/products/servers/altix/ice/.  The UA News article http://uanews.org/node/20578 discusses the HPC systems, including their world ranking in terms of power and "green-ness". Other HPC systems are described here: http://www.hpc.arizona.edu

** NOTE: All BIO5 researchers are encouraged to take advantage of the availability of high priority CPU hours resulting from dedicated ICE cluster compute nodes funded by a TRIF grant (see below for details).
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Running BLAST Jobs on the UA marin Supercomputer | Print |

General information on running supercomputer jobs can be found at: http://bcf.arl.arizona.edu/high-throughput-computing/high-performance-computing-system-marin-2.html

It is recommended that you read through the New High Performance Computing FAQ in addition to this BLAST FAQ.

 

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High Performance Computing System FAQs | Print |
The U of A UITS (formerly CCIT) group maintains High Performance Computing systems for use in research applications. A shared memory supercomputer (marin) and a Linux cluster (ICE) are available for running jobs requiring a large amount of memory, parallel processing, and certain visualization and scientific applications.  ICE is a large cluster of Silicon Graphics Altix machines (8 cpus per node); for more details see: http://www.sgi.com/products/servers/altix/ice/.  The UA News article http://uanews.org/node/20578 discusses the HPC systems, including their world ranking in terms of power and "green-ness".
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SCOOTaR FAQ | Print |
SCOOTaR is a web-based open source tool that can organize BLAST results.
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